nixpkgs / deeptools - deepTools contains useful modules to process the mapped reads data for multiple quality checks, creating normalized coverage files in standard bedGraph and bigWig file formats, that allow comparison between different files (for example, treatment and control). Finally, using such normalized and standardized files, deepTools can create many publication-ready visualizations to identify enrichments and for functional annotations of the genome.

Homepage - https://deeptools.readthedocs.io/en/develop

License - GPL-3.0

Maintainers - Tom Sorlie

Releases

3.5.0 (expand/collapse)
From commit 06749ba3 to 00460bd6
3.4.1 (expand/collapse)
From commit 05fe6112 to 05fe6112
3.5.0 (expand/collapse)
From commit 06f2fd5f to 0096eb92
3.4.1 (expand/collapse)
From commit 00afc855 to 00afc855
3.5.0 (expand/collapse)
From commit 0722158d to 07e49512
3.4.1 (expand/collapse)
From commit 04b7c0af to 04b7c0af
3.5.0 (expand/collapse)
From commit 05d4955a to 03df9f54
3.4.1 (expand/collapse)
From commit 00251c06 to 00251c06
3.5.0 (expand/collapse)
From commit 05659a44 to 06d328c3
3.4.1 (expand/collapse)
From commit 069e485c to 069e485c
3.5.0 (expand/collapse)
From commit 04774974 to 019fa5f6
3.4.1 (expand/collapse)
From commit 0628b032 to 01ec8c09
3.5.0 (expand/collapse)
From commit 0385e609 to 072e98a7
3.4.1 (expand/collapse)
From commit 063f1d73 to 00f0b1d7
3.5.0 (expand/collapse)
From commit 0367125b to 0367125b
3.4.1 (expand/collapse)
From commit 024877e7 to 0331c39d
3.3.1 (expand/collapse)
From commit 04a5e5ab to 04a5e5ab
3.4.1 (expand/collapse)
From commit 0288741d to 0288741d
3.3.1 (expand/collapse)
From commit 03f3d67e to 03f3d67e
3.4.1 (expand/collapse)
From commit 04744249 to 01c9c9b1
3.3.1 (expand/collapse)
From commit 00ac18cd to 00ca0c48